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The service is for certain things that require elevation (creating the desktop context menu entries, setting the lock screen image, and disabling the nvidia helpers when using Surround). It unfortunately can't what's needed for moving/re-sizing apps though. Those are done via the main process, so even if the service is registered, the main process still needs to run elevated.
Quick question, if you're elevating the main process and also manually registering the service, is there any reason for not just using the installer? Once you've done those things, there's no real difference from using the installer.