Hi,
This isn't a particularly new topic, as my problem is very similar to the ones described previously in
this post and
this post but I wasn't sure if bumping those older threads would be helpful or not.
Like those previous posters, I'm having a problem where the taskbar has been hidden behind my Firefox. I've had this problem for quite a while now, but seeing as how there were updates both for DisplayFusion, and ClassicShell, and I'm still getting these issues, I thought I'd finally post something.
I'm using a Windows 7 Professional 64-bit system with Service Pack 1, DisplayFusion Pro on Steam v5.1.1 with ClassicShell 4.0.2. In my Windows Taskbar settings, I do have Auto-hide enabled, and in the DisplayFusion settings, I have "Show taskbar in front of full screen applications when they lose focus" checked. This is on a dual monitor setup, with both screens running at 1980x1080 resolution.
What happens is that I normally run Firefox (version 25.0.1) on my secondary monitor, maximized. Fairly frequently, whenever I go into a full screen application, such as a game, if I try to bring up the taskbar on my secondary monitor, it simply won't come up, even if I take focus away from the game. If I then bring up the taskbar on my primary monitor, I can see the taskbar on my secondary come up behind Firefox (thanks to the glass like theme I use in Firefox, I can see things behind it) although I still can't interact with it. Like the previous posts, minimizing Firefox and restoring it will fix it for that occasion, though the issue can easily happen again.
I've attached a screenshot of the taskbar behind Firefox as well as a copy of the contents of the Troubleshooting tab in DisplayFusion, taken a few seconds after the screenshot.